Difference between revisions of "TSS:Mm 101257.1"
From referenceTSS
| Line 4: | Line 4: | ||
|Hspc159= | |Hspc159= | ||
|Lgalsla= | |Lgalsla= | ||
| − | |all_trans=AK156350:75 NM_173752 | + | |all_trans=AK156350:75 NM_173752:203 BC019131:254 ENSMUST00000047028.8:255 ENSMUST00000154300.7:255 AK167557:271 ENSMUST00000132928.1:289 AK041053:289 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 13: | Line 13: | ||
|entrez_id=216551 | |entrez_id=216551 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
| − | |gene_alias=1110067D22Rik | + | |gene_alias=1110067D22Rik{{!}}A530071M23{{!}}Grpa{{!}}Hspc159{{!}}Lgalsla |
| − | |gene_description= | + | |gene_description=lectin, galactoside binding-like |
|gene_id=216551 | |gene_id=216551 | ||
| − | |gene_name= | + | |gene_name=lectin, galactoside binding-like |
|gene_source=MGI:1916114 | |gene_source=MGI:1916114 | ||
|gene_symbol=Lgalsl | |gene_symbol=Lgalsl | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_173752 | |nearest_refseq=NM_173752 | ||
|nearest_unigene=Mm.76694 | |nearest_unigene=Mm.76694 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=mouse | |species=mouse | ||
|start=20831310 | |start=20831310 | ||
Revision as of 16:36, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 20831321 |
|---|---|
| End of the center position in the TSS region: | 20831322 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK156350 |
|---|---|
| Distance: | 75 |
| Num_trans: | 8 |
| All_trans: | AK156350:75 NM_173752:203 BC019131:254 ENSMUST00000047028.8:255 ENSMUST00000154300.7:255 AK167557:271 ENSMUST00000132928.1:289 AK041053:289 |
TATA-Box annotation
| Distance to TSS: | -213 |
|---|---|
| Nearest PromoterID: | NM_173752 |
| Entrez ID: | 216551 |
| Nearest Unigene: | Mm.76694 |
| Nearest Refseq: | NM_173752 |
| Nearest Ensembl: | ENSMUSG00000042363 |
| Gene Name: | lectin, galactoside binding-like |
| Gene Alias: | 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla |
| Gene Description: | lectin, galactoside binding-like |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
