Difference between revisions of "TSS:Mm 101260.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.015 |distance= |distance_to_tss=-67627 |end=20898743 |entrez_id=216551 |gc_percent=0.522388 |gene_alias=1110067D22Rik|A530071M23|Grpa|Hsp...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |A530071M23= | ||
| + | |Grpa= | ||
| + | |Hspc159= | ||
| + | |Lgalsla= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-67627 | |distance_to_tss=-67627 | ||
|end=20898743 | |end=20898743 | ||
| + | |end_of_center_position=20898735 | ||
|entrez_id=216551 | |entrez_id=216551 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=1110067D22Rik | + | |gene_alias=1110067D22Rik{{!}}A530071M23{{!}}Grpa{{!}}Hspc159{{!}}Lgalsla |
| − | |gene_description= | + | |gene_description=lectin, galactoside binding-like |
|gene_name=Lgalsl | |gene_name=Lgalsl | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 18: | Line 23: | ||
|species=mouse | |species=mouse | ||
|start=20898726 | |start=20898726 | ||
| + | |start_of_center_position=20898734 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=13(TCTTATAAAGGA,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:36, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 20898734 |
|---|---|
| End of the center position in the TSS region: | 20898735 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -67627 |
|---|---|
| Nearest PromoterID: | NM_173752 |
| Entrez ID: | 216551 |
| Nearest Unigene: | Mm.76694 |
| Nearest Refseq: | NM_173752 |
| Nearest Ensembl: | ENSMUSG00000042363 |
| Gene Name: | Lgalsl |
| Gene Alias: | 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla |
| Gene Description: | lectin, galactoside binding-like |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 13(TCTTATAAAGGA,+,0.00) |
