Difference between revisions of "TSS:Mm 101280.1"
From referenceTSS
| Line 7: | Line 7: | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=1964 | |distance_to_tss=1964 | ||
|end=21569971 | |end=21569971 | ||
| Line 13: | Line 13: | ||
|entrez_id=17449 | |entrez_id=17449 | ||
|gc_percent=0.298507 | |gc_percent=0.298507 | ||
| − | |gene_alias=B230377B03Rik | + | |gene_alias=B230377B03Rik{{!}}D17921{{!}}MDH-s{{!}}MDHA{{!}}Mor-2{{!}}Mor2 |
| − | |gene_description= | + | |gene_description=malate dehydrogenase 1, NAD (soluble) |
|gene_name=Mdh1 | |gene_name=Mdh1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 26: | Line 26: | ||
|start_of_center_position=21569969 | |start_of_center_position=21569969 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=13(CTTTTTAAAAGG,+,0.00),13(CTTTTTAAAAGG,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:36, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 21569969 |
|---|---|
| End of the center position in the TSS region: | 21569970 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 1964 |
|---|---|
| Nearest PromoterID: | NM_008618 |
| Entrez ID: | 17449 |
| Nearest Unigene: | Mm.212703 |
| Nearest Refseq: | NM_008618 |
| Nearest Ensembl: | ENSMUSG00000020321 |
| Gene Name: | Mdh1 |
| Gene Alias: | B230377B03Rik|D17921|MDH-s|MDHA|Mor-2|Mor2 |
| Gene Description: | malate dehydrogenase 1, NAD (soluble) |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.298507 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 13(CTTTTTAAAAGG,+,0.00),13(CTTTTTAAAAGG,-,0.00) |
