Difference between revisions of "TSS:Mm 101289.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000006071.13:0 AK158588:0 AK042975:0 AK083434:0 AK050758:0 AK083671:12 NM_011023 | + | |all_trans=ENSMUST00000006071.13:0 AK158588:0 AK042975:0 AK083434:0 AK050758:0 AK083671:12 NM_011023:-20 BC057105:45 ENSMUST00000172395.2:-79 AK049430:-79 LF203865:123 MA439442:123 BC058354:445 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| Line 9: | Line 9: | ||
|entrez_id=18423 | |entrez_id=18423 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=A730044F23Rik | + | |gene_alias=A730044F23Rik{{!}}jv |
|gene_description=orthodenticle homeobox 1 | |gene_description=orthodenticle homeobox 1 | ||
|gene_id=18423 | |gene_id=18423 | ||
Revision as of 16:37, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 22001618 |
|---|---|
| End of the center position in the TSS region: | 22001619 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000006071.13 AK158588 AK042975 AK083434 AK050758 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENSMUST00000006071.13:0 AK158588:0 AK042975:0 AK083434:0 AK050758:0 AK083671:12 NM_011023:-20 BC057105:45 ENSMUST00000172395.2:-79 AK049430:-79 LF203865:123 MA439442:123 BC058354:445 |
TATA-Box annotation
| Distance to TSS: | 33 |
|---|---|
| Nearest PromoterID: | NM_011023 |
| Entrez ID: | 18423 |
| Nearest Unigene: | Mm.129663 |
| Nearest Refseq: | NM_011023 |
| Nearest Ensembl: | ENSMUSG00000005917 |
| Gene Name: | orthodenticle homeobox 1 |
| Gene Alias: | A730044F23Rik|jv |
| Gene Description: | orthodenticle homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
