Difference between revisions of "TSS:Mm 101292.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.005 |distance= |distance_to_tss=-46378 |end=22048031 |entrez_id=18423 |gc_percent=0.38806 |gene_alias=A730044F23Rik|jv |gene_description=...") |
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|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-46378 | |distance_to_tss=-46378 | ||
|end=22048031 | |end=22048031 | ||
| + | |end_of_center_position=22048029 | ||
|entrez_id=18423 | |entrez_id=18423 | ||
|gc_percent=0.38806 | |gc_percent=0.38806 | ||
| − | |gene_alias=A730044F23Rik | + | |gene_alias=A730044F23Rik{{!}}jv |
|gene_description=orthodenticle homeobox 1 | |gene_description=orthodenticle homeobox 1 | ||
|gene_name=Otx1 | |gene_name=Otx1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |jv= | ||
|nearest_ensembl=ENSMUSG00000005917 | |nearest_ensembl=ENSMUSG00000005917 | ||
|nearest_promoter_id=NM_011023 | |nearest_promoter_id=NM_011023 | ||
| Line 18: | Line 20: | ||
|species=mouse | |species=mouse | ||
|start=22048026 | |start=22048026 | ||
| + | |start_of_center_position=22048028 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 16:37, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 22048028 |
|---|---|
| End of the center position in the TSS region: | 22048029 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -46378 |
|---|---|
| Nearest PromoterID: | NM_011023 |
| Entrez ID: | 18423 |
| Nearest Unigene: | Mm.129663 |
| Nearest Refseq: | NM_011023 |
| Nearest Ensembl: | ENSMUSG00000005917 |
| Gene Name: | Otx1 |
| Gene Alias: | A730044F23Rik|jv |
| Gene Description: | orthodenticle homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.38806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
