Difference between revisions of "TSS:Mm 101307.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000180581.1:-483 AK138446:-483 |chr=chr11 |cpg_percent=0.005 |distance=-483 |distance_to_tss=98106 |end=22610396 |entrez_id=103765 |gc_percent=...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |AW049890= |
| + | |all_trans=AK138446:-483 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=98106 | |distance_to_tss=98106 | ||
|end=22610396 | |end=22610396 | ||
| + | |end_of_center_position=22610389 | ||
|entrez_id=103765 | |entrez_id=103765 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias=AI503894 | + | |gene_alias=AI503894{{!}}AW049890 |
|gene_description=transmembrane protein 17 | |gene_description=transmembrane protein 17 | ||
|gene_id= | |gene_id= | ||
| − | |gene_name= | + | |gene_name=Tmem17 |
|gene_source=MGI:5477323 | |gene_source=MGI:5477323 | ||
|gene_symbol=Gm26829 | |gene_symbol=Gm26829 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_153596 | |nearest_refseq=NM_153596 | ||
|nearest_unigene=Mm.221274 | |nearest_unigene=Mm.221274 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=mouse | |species=mouse | ||
|start=22610381 | |start=22610381 | ||
| + | |start_of_center_position=22610388 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK138446 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_101307.1 | |tss_id=mm_101307.1 | ||
Latest revision as of 16:37, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 22610388 |
|---|---|
| End of the center position in the TSS region: | 22610389 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK138446 |
|---|---|
| Distance: | -483 |
| Num_trans: | 1 |
| All_trans: | AK138446:-483 |
TATA-Box annotation
| Distance to TSS: | 98106 |
|---|---|
| Nearest PromoterID: | NM_153596 |
| Entrez ID: | 103765 |
| Nearest Unigene: | Mm.221274 |
| Nearest Refseq: | NM_153596 |
| Nearest Ensembl: | ENSMUSG00000049904 |
| Gene Name: | Tmem17 |
| Gene Alias: | AI503894|AW049890 |
| Gene Description: | transmembrane protein 17 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
