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Difference between revisions of "TSS:Mm 10132.1"

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Line 6: Line 6:
 
|Gm13190=
 
|Gm13190=
 
|OTTMUSG00000010806=
 
|OTTMUSG00000010806=
|all_trans=ENSMUST00000138735.1:0 ENSMUST00000137809.1:12 uc008iel.1:12 AK048013:12 ENSMUST00000177457.7:22
+
|all_trans=ENSMUST00000138735.1:0 ENSMUST00000137809.1:12 AK048013:12 ENSMUST00000177457.7:22 NM_001347086:-24
 
|chr=chr2
 
|chr=chr2
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 15: Line 15:
 
|entrez_id=209630
 
|entrez_id=209630
 
|gc_percent=0.577114
 
|gc_percent=0.577114
|gene_alias=2700017I06Rik
+
|gene_alias=2700017I06Rik{{!}}5330420J21{{!}}AI594879{{!}}C230040M21Rik{{!}}Frmd4{{!}}Gm13190{{!}}mKIAA1294
 
|gene_description=FERM domain containing 4A
 
|gene_description=FERM domain containing 4A
 
|gene_id=209630
 
|gene_id=209630

Revision as of 16:37, 19 June 2021

Basic information about the TSS


TSS ID:mm_10132.1
Species:mouse
Chr:chr2
TSS Classification:yes
Start:4017706
End:4017722
Strand:+
TSS Score:1
Start of the center position in the TSS region:4017714
End of the center position in the TSS region:4017715



Gene and protein annotation


Transcript_name:ENSMUST00000138735.1
Distance:0
GeneID:209630
HGNC/MGI_ID:MGI:1919850
UniProt_ID:
Gene_name:FERM domain containing 4A
Gene_symbol:Frmd4a
Gene_synonyms:2700017I06Rik C230040M21Rik Gm13190
Gene_source:MGI:1919850



Transcript annotation


Transcript_name:ENSMUST00000138735.1
Distance:0
Num_trans:5
All_trans:ENSMUST00000138735.1:0 ENSMUST00000137809.1:12 AK048013:12 ENSMUST00000177457.7:22 NM_001347086:-24



TATA-Box annotation


Distance to TSS:31
Nearest PromoterID:NM_001347086
Entrez ID:209630
Nearest Unigene:Mm.37932
Nearest Refseq:NM_172475
Nearest Ensembl:ENSMUSG00000026657
Gene Name:FERM domain containing 4A
Gene Alias:2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294
Gene Description:FERM domain containing 4A
Gene Type:protein-coding
CpG%:0.015
GC%:0.577114
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):