Difference between revisions of "TSS:Mm 101331.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=55838 | |distance_to_tss=55838 | ||
|end=23069228 | |end=23069228 | ||
| Line 9: | Line 9: | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
|gene_alias=4930430E16Rik | |gene_alias=4930430E16Rik | ||
| − | |gene_description= | + | |gene_description=family with sequence similarity 161, member A |
|gene_name=Fam161a | |gene_name=Fam161a | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 21: | Line 21: | ||
|start_of_center_position=23069225 | |start_of_center_position=23069225 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-35(GCCTATAAAAGC,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:38, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 23069225 |
|---|---|
| End of the center position in the TSS region: | 23069226 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 55838 |
|---|---|
| Nearest PromoterID: | NM_028672 |
| Entrez ID: | 73873 |
| Nearest Unigene: | Mm.252406 |
| Nearest Refseq: | NM_028672 |
| Nearest Ensembl: | ENSMUSG00000049811 |
| Gene Name: | Fam161a |
| Gene Alias: | 4930430E16Rik |
| Gene Description: | family with sequence similarity 161, member A |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(GCCTATAAAAGC,-,0.00) |
