Difference between revisions of "TSS:Mm 101333.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Murr2= | |Murr2= | ||
| − | |all_trans= | + | |all_trans=AK088668:0 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| Line 10: | Line 10: | ||
|entrez_id=17847 | |entrez_id=17847 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
| − | |gene_alias=A530081C03Rik | + | |gene_alias=A530081C03Rik{{!}}Murr2 |
|gene_description=ubiquitin specific peptidase 34 | |gene_description=ubiquitin specific peptidase 34 | ||
|gene_id=100042202 | |gene_id=100042202 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001190401 | |nearest_refseq=NM_001190401 | ||
|nearest_unigene=Mm.119155 | |nearest_unigene=Mm.119155 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=mouse | |species=mouse | ||
|start=23306302 | |start=23306302 | ||
|start_of_center_position=23306309 | |start_of_center_position=23306309 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK088668 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101333.1 | |tss_id=mm_101333.1 | ||
Revision as of 16:38, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 23306309 |
|---|---|
| End of the center position in the TSS region: | 23306310 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK088668 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1 |
| All_trans: | AK088668:0 |
TATA-Box annotation
| Distance to TSS: | -586 |
|---|---|
| Nearest PromoterID: | NM_001190401 |
| Entrez ID: | 17847 |
| Nearest Unigene: | Mm.119155 |
| Nearest Refseq: | NM_001190401 |
| Nearest Ensembl: | ENSMUSG00000056342 |
| Gene Name: | predicted gene 3718 |
| Gene Alias: | A530081C03Rik|Murr2 |
| Gene Description: | ubiquitin specific peptidase 34 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
