Difference between revisions of "TSS:Mm 101335.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000020529.12:0 NM_172391:0 NM_001290655:0 NM_001290654 | + | |all_trans=ENSMUST00000020529.12:0 NM_172391:0 NM_001290655:0 NM_001290654:0 AK137116:77 AK154196:78 AK155265:78 AK093945:80 AK033696:80 BC052829:81 ENSMUST00000109539.7:96 BC038397:96 ENSMUST00000147157.7:121 BC055873:125 ENSMUST00000128559.1:131 BC064012:167 AK186357:234 ENSMUST00000128372.7:488 AK035941:488 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=AHA1, activator of heat shock protein ATPase 2 |
|gene_id=268390 | |gene_id=268390 | ||
| − | |gene_name= | + | |gene_name=AHA1, activator of heat shock protein ATPase 2 |
|gene_source=MGI:1916133 | |gene_source=MGI:1916133 | ||
|gene_symbol=Ahsa2 | |gene_symbol=Ahsa2 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_172391 | |nearest_refseq=NM_172391 | ||
|nearest_unigene=Mm.13148 | |nearest_unigene=Mm.13148 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=mouse | |species=mouse | ||
|start=23498025 | |start=23498025 | ||
|start_of_center_position=23498034 | |start_of_center_position=23498034 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000020529.12 NM_172391 NM_001290655 NM_001290654 | + | |transcript_name=ENSMUST00000020529.12 NM_172391 NM_001290655 NM_001290654 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101335.1 | |tss_id=mm_101335.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q8N9S3 | + | |uniprot_id=Q8N9S3 |
}} | }} | ||
Revision as of 16:38, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 23498034 |
|---|---|
| End of the center position in the TSS region: | 23498035 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000020529.12 NM_172391 NM_001290655 NM_001290654 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENSMUST00000020529.12:0 NM_172391:0 NM_001290655:0 NM_001290654:0 AK137116:77 AK154196:78 AK155265:78 AK093945:80 AK033696:80 BC052829:81 ENSMUST00000109539.7:96 BC038397:96 ENSMUST00000147157.7:121 BC055873:125 ENSMUST00000128559.1:131 BC064012:167 AK186357:234 ENSMUST00000128372.7:488 AK035941:488 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_001290655 |
| Entrez ID: | 268390 |
| Nearest Unigene: | Mm.13148 |
| Nearest Refseq: | NM_172391 |
| Nearest Ensembl: | ENSMUSG00000020288 |
| Gene Name: | AHA1, activator of heat shock protein ATPase 2 |
| Gene Alias: | - |
| Gene Description: | AHA1, activator of heat shock protein ATPase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
