Difference between revisions of "TSS:Mm 101337.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000020527. | + | |all_trans=ENSMUST00000239488.1:0 ENSMUST00000020527.12:0 NM_026105:0 BC049567:0 AK007052:81 AK007139:322 LF226565:-377 MA462142:-377 NM_001110133:-468 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 9: | Line 9: | ||
|entrez_id=67358 | |entrez_id=67358 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias= | + | |gene_alias=b2b3025Clo |
|gene_description=RIKEN cDNA 1700093K21 gene | |gene_description=RIKEN cDNA 1700093K21 gene | ||
|gene_id=67358 | |gene_id=67358 | ||
| Line 15: | Line 15: | ||
|gene_source=MGI:1914608 | |gene_source=MGI:1914608 | ||
|gene_symbol=1700093K21Rik | |gene_symbol=1700093K21Rik | ||
| − | |gene_synonyms= | + | |gene_synonyms=b2b3025Clo |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1914608 | |hgnc_mgi_id=MGI:1914608 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_026105 | |nearest_refseq=NM_026105 | ||
|nearest_unigene=Mm.87328 | |nearest_unigene=Mm.87328 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=mouse | |species=mouse | ||
|start=23519181 | |start=23519181 | ||
|start_of_center_position=23519207 | |start_of_center_position=23519207 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000020527. | + | |transcript_name=ENSMUST00000239488.1 ENSMUST00000020527.12 NM_026105 BC049567 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101337.1 | |tss_id=mm_101337.1 | ||
Revision as of 16:38, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 23519207 |
|---|---|
| End of the center position in the TSS region: | 23519208 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000239488.1 ENSMUST00000020527.12 NM_026105 BC049567 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000239488.1:0 ENSMUST00000020527.12:0 NM_026105:0 BC049567:0 AK007052:81 AK007139:322 LF226565:-377 MA462142:-377 NM_001110133:-468 |
TATA-Box annotation
| Distance to TSS: | -12 |
|---|---|
| Nearest PromoterID: | NM_026105 |
| Entrez ID: | 67358 |
| Nearest Unigene: | Mm.87328 |
| Nearest Refseq: | NM_026105 |
| Nearest Ensembl: | ENSMUSG00000020286 |
| Gene Name: | RIKEN cDNA 1700093K21 gene |
| Gene Alias: | b2b3025Clo |
| Gene Description: | RIKEN cDNA 1700093K21 gene |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
