Difference between revisions of "TSS:Mm 101345.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC079876:0 BC072622:-1 AK129454:7 BC055049:7 ENSMUST00000180260.7:-11 ENSMUST00000141353.7:-11 ENSMUST00000131612.1:-11 | + | |all_trans=BC079876:0 BC072622:-1 AK129454:7 BC055049:7 ENSMUST00000180260.7:-11 ENSMUST00000141353.7:-11 ENSMUST00000131612.1:-11 NR_156450:-11 NM_001347242:-11 NM_027860:-11 AK053838:-11 ENSMUST00000109532.8:-19 ENSMUST00000155903.7:56 AK029538:56 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| Line 9: | Line 9: | ||
|entrez_id=71675 | |entrez_id=71675 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| − | |gene_alias=Kiaa1841 | + | |gene_alias=Kiaa1841{{!}}mKIAA1841 |
|gene_description=RIKEN cDNA 0610010F05 gene | |gene_description=RIKEN cDNA 0610010F05 gene | ||
|gene_id=71675 | |gene_id=71675 | ||
| Line 20: | Line 20: | ||
|mKIAA1841= | |mKIAA1841= | ||
|nearest_ensembl=ENSMUSG00000042208 | |nearest_ensembl=ENSMUSG00000042208 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_027860 |
|nearest_refseq=NM_027860 | |nearest_refseq=NM_027860 | ||
|nearest_unigene=Mm.48031 | |nearest_unigene=Mm.48031 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=mouse | |species=mouse | ||
|start=23633604 | |start=23633604 | ||
Revision as of 16:38, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 23633612 |
|---|---|
| End of the center position in the TSS region: | 23633613 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC079876 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | BC079876:0 BC072622:-1 AK129454:7 BC055049:7 ENSMUST00000180260.7:-11 ENSMUST00000141353.7:-11 ENSMUST00000131612.1:-11 NR_156450:-11 NM_001347242:-11 NM_027860:-11 AK053838:-11 ENSMUST00000109532.8:-19 ENSMUST00000155903.7:56 AK029538:56 |
TATA-Box annotation
| Distance to TSS: | 19 |
|---|---|
| Nearest PromoterID: | NM_027860 |
| Entrez ID: | 71675 |
| Nearest Unigene: | Mm.48031 |
| Nearest Refseq: | NM_027860 |
| Nearest Ensembl: | ENSMUSG00000042208 |
| Gene Name: | RIKEN cDNA 0610010F05 gene |
| Gene Alias: | Kiaa1841|mKIAA1841 |
| Gene Description: | RIKEN cDNA 0610010F05 gene |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
