Difference between revisions of "TSS:Mm 101354.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK081287:-405 |chr=chr11 |cpg_percent=0.01 |distance=-405 |distance_to_tss=31029 |end=23739952 |entrez_id=19696 |gc_percent=0.402985 |gene_alias=c-Rel |...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK081287:-405 | + | |all_trans=LF204413:-341 MA439990:-341 AK081287:-405 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance=- | + | |distance=-341 |
| − | |distance_to_tss= | + | |distance_to_tss=31028 |
|end=23739952 | |end=23739952 | ||
| + | |end_of_center_position=23739942 | ||
|entrez_id=19696 | |entrez_id=19696 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
| Line 11: | Line 12: | ||
|gene_description=reticuloendotheliosis oncogene | |gene_description=reticuloendotheliosis oncogene | ||
|gene_id=327885 | |gene_id=327885 | ||
| − | |gene_name= | + | |gene_name=Rel |
|gene_source=EntrezGene:327885 | |gene_source=EntrezGene:327885 | ||
|gene_symbol=C030046G05 | |gene_symbol=C030046G05 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_009044 | |nearest_refseq=NM_009044 | ||
|nearest_unigene=Mm.4869 | |nearest_unigene=Mm.4869 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=mouse | |species=mouse | ||
|start=23739930 | |start=23739930 | ||
| + | |start_of_center_position=23739941 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF204413 MA439990 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_101354.1 | |tss_id=mm_101354.1 | ||
Latest revision as of 16:38, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 23739941 |
|---|---|
| End of the center position in the TSS region: | 23739942 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | LF204413 MA439990 |
|---|---|
| Distance: | -341 |
| Num_trans: | 3 |
| All_trans: | LF204413:-341 MA439990:-341 AK081287:-405 |
TATA-Box annotation
| Distance to TSS: | 31028 |
|---|---|
| Nearest PromoterID: | NM_009044 |
| Entrez ID: | 19696 |
| Nearest Unigene: | Mm.4869 |
| Nearest Refseq: | NM_009044 |
| Nearest Ensembl: | ENSMUSG00000020275 |
| Gene Name: | Rel |
| Gene Alias: | c-Rel |
| Gene Description: | reticuloendotheliosis oncogene |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
