Difference between revisions of "TSS:Mm 101370.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK031627:-19 BC139447:-162 BC139448:-162 BC139770:-164 | + | |all_trans=AK031627:-19 BC139447:-162 BC139448:-162 BC139770:-164 NM_009044:-221 ENSMUST00000102864.4:-222 X15842:-222 X60271:-222 AK172490:-245 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=-19 | |distance=-19 | ||
| − | |distance_to_tss= | + | |distance_to_tss=227 |
|end=23770748 | |end=23770748 | ||
|end_of_center_position=23770743 | |end_of_center_position=23770743 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_009044 | |nearest_refseq=NM_009044 | ||
|nearest_unigene=Mm.4869 | |nearest_unigene=Mm.4869 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=mouse | |species=mouse | ||
|start=23770736 | |start=23770736 | ||
Revision as of 16:38, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 23770742 |
|---|---|
| End of the center position in the TSS region: | 23770743 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK031627 |
|---|---|
| Distance: | -19 |
| Num_trans: | 9 |
| All_trans: | AK031627:-19 BC139447:-162 BC139448:-162 BC139770:-164 NM_009044:-221 ENSMUST00000102864.4:-222 X15842:-222 X60271:-222 AK172490:-245 |
TATA-Box annotation
| Distance to TSS: | 227 |
|---|---|
| Nearest PromoterID: | NM_009044 |
| Entrez ID: | 19696 |
| Nearest Unigene: | Mm.4869 |
| Nearest Refseq: | NM_009044 |
| Nearest Ensembl: | ENSMUSG00000020275 |
| Gene Name: | reticuloendotheliosis oncogene |
| Gene Alias: | c-Rel |
| Gene Description: | reticuloendotheliosis oncogene |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
