Difference between revisions of "TSS:Mm 101380.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK172490:287 ENSMUST00000102864.4:310 NM_009044:310 uc007ifo.1:310 X15842:310 X60271:310 BC139770:368 BC139447:370 BC139448:370 |chr=chr11 |cpg_percent=...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK172490:287 ENSMUST00000102864.4 | + | |all_trans=AK172490:287 ENSMUST00000102864.4:310 X15842:310 X60271:310 NM_009044:311 BC139770:368 BC139447:370 BC139448:370 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
|distance=287 | |distance=287 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-317 |
|end=23771293 | |end=23771293 | ||
| + | |end_of_center_position=23771287 | ||
|entrez_id=19696 | |entrez_id=19696 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| Line 16: | Line 17: | ||
|nearest_refseq=NM_009044 | |nearest_refseq=NM_009044 | ||
|nearest_unigene=Mm.4869 | |nearest_unigene=Mm.4869 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=mouse | |species=mouse | ||
|start=23771279 | |start=23771279 | ||
| + | |start_of_center_position=23771286 | ||
|strand=- | |strand=- | ||
|transcript_name=AK172490 | |transcript_name=AK172490 | ||
Latest revision as of 16:39, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 23771286 |
|---|---|
| End of the center position in the TSS region: | 23771287 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK172490 |
|---|---|
| Distance: | 287 |
| Num_trans: | 8 |
| All_trans: | AK172490:287 ENSMUST00000102864.4:310 X15842:310 X60271:310 NM_009044:311 BC139770:368 BC139447:370 BC139448:370 |
TATA-Box annotation
| Distance to TSS: | -317 |
|---|---|
| Nearest PromoterID: | NM_009044 |
| Entrez ID: | 19696 |
| Nearest Unigene: | Mm.4869 |
| Nearest Refseq: | NM_009044 |
| Nearest Ensembl: | ENSMUSG00000020275 |
| Gene Name: | Rel |
| Gene Alias: | c-Rel |
| Gene Description: | reticuloendotheliosis oncogene |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
