Difference between revisions of "TSS:Mm 101386.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000020513.9:0 ENSMUST00000102863.2:0 NM_172555 | + | |all_trans=ENSMUST00000020513.9:0 ENSMUST00000102863.2:0 NM_172555:0 BC049163:0 BC059271:0 AK035810:0 AK042629:0 AK139065:0 DQ103505:133 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_172555 | |nearest_refseq=NM_172555 | ||
|nearest_unigene=Mm.470599 | |nearest_unigene=Mm.470599 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=mouse | |species=mouse | ||
|start=23895208 | |start=23895208 | ||
|start_of_center_position=23895244 | |start_of_center_position=23895244 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000020513.9 ENSMUST00000102863.2 NM_172555 | + | |transcript_name=ENSMUST00000020513.9 ENSMUST00000102863.2 NM_172555 BC049163 BC059271 AK035810 AK042629 AK139065 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101386.1 | |tss_id=mm_101386.1 | ||
Revision as of 16:39, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 23895244 |
|---|---|
| End of the center position in the TSS region: | 23895245 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000020513.9 ENSMUST00000102863.2 NM_172555 BC049163 BC059271 AK035810 AK042629 AK139065 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000020513.9:0 ENSMUST00000102863.2:0 NM_172555:0 BC049163:0 BC059271:0 AK035810:0 AK042629:0 AK139065:0 DQ103505:133 |
TATA-Box annotation
| Distance to TSS: | 26 |
|---|---|
| Nearest PromoterID: | NM_172555 |
| Entrez ID: | 216578 |
| Nearest Unigene: | Mm.470599 |
| Nearest Refseq: | NM_172555 |
| Nearest Ensembl: | ENSMUSG00000020273 |
| Gene Name: | poly(A) polymerase gamma |
| Gene Alias: | 9630006B20Rik |
| Gene Description: | poly(A) polymerase gamma |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
