Difference between revisions of "TSS:Mm 101388.1"
From referenceTSS
| Line 7: | Line 7: | ||
|Evi9b= | |Evi9b= | ||
|Evi9c= | |Evi9c= | ||
| − | |all_trans=ENSMUST00000146717.1:-8 | + | |all_trans=ENSMUST00000146717.1:-8 NR_167718:-8 NR_167719:-8 AK019722:-8 ENSMUST00000131383.1:-51 AK019630:-51 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 16: | Line 16: | ||
|entrez_id=14025 | |entrez_id=14025 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| − | |gene_alias=2810047E18Rik | + | |gene_alias=2810047E18Rik{{!}}BCL-11A{{!}}Ctip1{{!}}D930021L15Rik{{!}}Evi9{{!}}Evi9a{{!}}Evi9b{{!}}Evi9c{{!}}mKIAA1809 |
|gene_description=B cell CLL/lymphoma 11A (zinc finger protein) | |gene_description=B cell CLL/lymphoma 11A (zinc finger protein) | ||
|gene_id=78200 | |gene_id=78200 | ||
| Line 35: | Line 35: | ||
|start_of_center_position=24172769 | |start_of_center_position=24172769 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000146717.1 AK019722 | + | |transcript_name=ENSMUST00000146717.1 NR_167718 NR_167719 AK019722 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101388.1 | |tss_id=mm_101388.1 | ||
Revision as of 16:39, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 24172769 |
|---|---|
| End of the center position in the TSS region: | 24172770 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000146717.1 NR_167718 NR_167719 AK019722 |
|---|---|
| Distance: | -8 |
| Num_trans: | 6 |
| All_trans: | ENSMUST00000146717.1:-8 NR_167718:-8 NR_167719:-8 AK019722:-8 ENSMUST00000131383.1:-51 AK019630:-51 |
TATA-Box annotation
| Distance to TSS: | 92075 |
|---|---|
| Nearest PromoterID: | NM_001159290 |
| Entrez ID: | 14025 |
| Nearest Unigene: | Mm.53687 |
| Nearest Refseq: | NM_016707 |
| Nearest Ensembl: | ENSMUSG00000000861 |
| Gene Name: | RIKEN cDNA 4930538E20 gene |
| Gene Alias: | 2810047E18Rik|BCL-11A|Ctip1|D930021L15Rik|Evi9|Evi9a|Evi9b|Evi9c|mKIAA1809 |
| Gene Description: | B cell CLL/lymphoma 11A (zinc finger protein) |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
