Difference between revisions of "TSS:Mm 101406.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0 |distance= |distance_to_tss=-766 |end=26594717 |entrez_id=69922 |gc_percent=0.422886 |gene_alias=2810003O05Rik|AI447698 |gene_description...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AI447698= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-766 | |distance_to_tss=-766 | ||
|end=26594717 | |end=26594717 | ||
| + | |end_of_center_position=26594686 | ||
|entrez_id=69922 | |entrez_id=69922 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
| − | |gene_alias=2810003O05Rik | + | |gene_alias=2810003O05Rik{{!}}AI447698 |
|gene_description=vaccinia related kinase 2 | |gene_description=vaccinia related kinase 2 | ||
|gene_name=Vrk2 | |gene_name=Vrk2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000064090 | |nearest_ensembl=ENSMUSG00000064090 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_027260 |
|nearest_refseq=NM_027260 | |nearest_refseq=NM_027260 | ||
|nearest_unigene=Mm.285351 | |nearest_unigene=Mm.285351 | ||
| Line 18: | Line 20: | ||
|species=mouse | |species=mouse | ||
|start=26594654 | |start=26594654 | ||
| + | |start_of_center_position=26594685 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 16:39, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 26594685 |
|---|---|
| End of the center position in the TSS region: | 26594686 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -766 |
|---|---|
| Nearest PromoterID: | NM_027260 |
| Entrez ID: | 69922 |
| Nearest Unigene: | Mm.285351 |
| Nearest Refseq: | NM_027260 |
| Nearest Ensembl: | ENSMUSG00000064090 |
| Gene Name: | Vrk2 |
| Gene Alias: | 2810003O05Rik|AI447698 |
| Gene Description: | vaccinia related kinase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
