Difference between revisions of "TSS:Mm 101416.1"
From referenceTSS
| Line 2: | Line 2: | ||
|4931428D14Rik= | |4931428D14Rik= | ||
|Ccdc104= | |Ccdc104= | ||
| − | |all_trans=ENSMUST00000141862.7:0 NM_025740 | + | |all_trans=ENSMUST00000141862.7:0 NM_025740:0 AK075858:0 AK016479:0 BC005731:0 AK010468:0 ENSMUST00000127940.1:17 ENSMUST00000020754.9:-80 ENSMUST00000144627.1:141 AK219590:147 ENSMUST00000134599.1:287 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 11: | Line 11: | ||
|entrez_id=216618 | |entrez_id=216618 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=2300003H10 | + | |gene_alias=2300003H10{{!}}4931428D14Rik{{!}}Ccdc104 |
|gene_description=cilia and flagella associated protein 36 | |gene_description=cilia and flagella associated protein 36 | ||
|gene_id=216618 | |gene_id=216618 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_025740 | |nearest_refseq=NM_025740 | ||
|nearest_unigene=Mm.128663 | |nearest_unigene=Mm.128663 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=mouse | |species=mouse | ||
|start=29247208 | |start=29247208 | ||
|start_of_center_position=29247268 | |start_of_center_position=29247268 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000141862.7 NM_025740 | + | |transcript_name=ENSMUST00000141862.7 NM_025740 AK075858 AK016479 BC005731 AK010468 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101416.1 | |tss_id=mm_101416.1 | ||
Revision as of 16:40, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 29247268 |
|---|---|
| End of the center position in the TSS region: | 29247269 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000141862.7 NM_025740 AK075858 AK016479 BC005731 AK010468 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENSMUST00000141862.7:0 NM_025740:0 AK075858:0 AK016479:0 BC005731:0 AK010468:0 ENSMUST00000127940.1:17 ENSMUST00000020754.9:-80 ENSMUST00000144627.1:141 AK219590:147 ENSMUST00000134599.1:287 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_025740 |
| Entrez ID: | 216618 |
| Nearest Unigene: | Mm.128663 |
| Nearest Refseq: | NM_025740 |
| Nearest Ensembl: | ENSMUSG00000020462 |
| Gene Name: | cilia and flagella associated protein 36 |
| Gene Alias: | 2300003H10|4931428D14Rik|Ccdc104 |
| Gene Description: | cilia and flagella associated protein 36 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
