Difference between revisions of "TSS:Mm 101419.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |2410112O06Rik= | ||
| + | |IF-2(Mt)= | ||
| + | |IF-2mt= | ||
| + | |IF2(mt)= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-36 | |distance_to_tss=-36 | ||
|end=29526379 | |end=29526379 | ||
| + | |end_of_center_position=29526362 | ||
|entrez_id=76784 | |entrez_id=76784 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=2310038D14Rik | + | |gene_alias=2310038D14Rik{{!}}2410112O06Rik{{!}}IF-2(Mt){{!}}IF-2mt{{!}}IF2(mt) |
|gene_description=mitochondrial translational initiation factor 2 | |gene_description=mitochondrial translational initiation factor 2 | ||
|gene_name=Mtif2 | |gene_name=Mtif2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000020459 | |nearest_ensembl=ENSMUSG00000020459 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001282118 |
|nearest_refseq=NM_133767 | |nearest_refseq=NM_133767 | ||
|nearest_unigene=Mm.285429 | |nearest_unigene=Mm.285429 | ||
| Line 18: | Line 23: | ||
|species=mouse | |species=mouse | ||
|start=29526343 | |start=29526343 | ||
| + | |start_of_center_position=29526361 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 16:40, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 29526361 |
|---|---|
| End of the center position in the TSS region: | 29526362 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -36 |
|---|---|
| Nearest PromoterID: | NM_001282118 |
| Entrez ID: | 76784 |
| Nearest Unigene: | Mm.285429 |
| Nearest Refseq: | NM_133767 |
| Nearest Ensembl: | ENSMUSG00000020459 |
| Gene Name: | Mtif2 |
| Gene Alias: | 2310038D14Rik|2410112O06Rik|IF-2(Mt)|IF-2mt|IF2(mt) |
| Gene Description: | mitochondrial translational initiation factor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
