Difference between revisions of "TSS:Mm 101425.1"
From referenceTSS
| Line 3: | Line 3: | ||
|Ubb= | |Ubb= | ||
|Ubc= | |Ubc= | ||
| − | |all_trans=ENSMUST00000102845.10:386 | + | |all_trans=ENSMUST00000102845.10:386 NM_001033865:455 NM_024277:455 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| Line 12: | Line 12: | ||
|entrez_id=78294 | |entrez_id=78294 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| − | |gene_alias=0610006J14Rik | + | |gene_alias=0610006J14Rik{{!}}Uba52{{!}}Ubb{{!}}Ubc |
|gene_description=ribosomal protein S27A | |gene_description=ribosomal protein S27A | ||
| − | |gene_id= | + | |gene_id=78294 |
|gene_name=ribosomal protein S27A | |gene_name=ribosomal protein S27A | ||
|gene_source=MGI:1925544 | |gene_source=MGI:1925544 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_024277 | |nearest_refseq=NM_024277 | ||
|nearest_unigene=Mm.180003 | |nearest_unigene=Mm.180003 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=mouse | |species=mouse | ||
|start=29548494 | |start=29548494 | ||
Revision as of 16:40, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 29548503 |
|---|---|
| End of the center position in the TSS region: | 29548504 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000102845.10 |
|---|---|
| Distance: | 386 |
| Num_trans: | 3 |
| All_trans: | ENSMUST00000102845.10:386 NM_001033865:455 NM_024277:455 |
TATA-Box annotation
| Distance to TSS: | -463 |
|---|---|
| Nearest PromoterID: | NM_001033865 |
| Entrez ID: | 78294 |
| Nearest Unigene: | Mm.180003 |
| Nearest Refseq: | NM_024277 |
| Nearest Ensembl: | ENSMUSG00000020460 |
| Gene Name: | ribosomal protein S27A |
| Gene Alias: | 0610006J14Rik|Uba52|Ubb|Ubc |
| Gene Description: | ribosomal protein S27A |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
