Difference between revisions of "TSS:Mm 101426.1"
From referenceTSS
| Line 13: | Line 13: | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=24351 | |distance_to_tss=24351 | ||
|end=29742916 | |end=29742916 | ||
| Line 19: | Line 19: | ||
|entrez_id=68585 | |entrez_id=68585 | ||
|gc_percent=0.338308 | |gc_percent=0.338308 | ||
| − | |gene_alias=1110020G17Rik | + | |gene_alias=1110020G17Rik{{!}}AA407876{{!}}AA409940{{!}}AA960376{{!}}ASY{{!}}C130026I10Rik{{!}}NOGO{{!}}NSP-CL{{!}}NgA{{!}}Nogo-A{{!}}Nogo-B{{!}}Nogo-C{{!}}mKIAA0886{{!}}mKIAA4153 |
|gene_description=reticulon 4 | |gene_description=reticulon 4 | ||
|gene_name=Rtn4 | |gene_name=Rtn4 | ||
| Line 34: | Line 34: | ||
|start_of_center_position=29742914 | |start_of_center_position=29742914 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-95(CTTTCTAAAAGC,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:40, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 29742914 |
|---|---|
| End of the center position in the TSS region: | 29742915 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 24351 |
|---|---|
| Nearest PromoterID: | NM_024226 |
| Entrez ID: | 68585 |
| Nearest Unigene: | Mm.192580 |
| Nearest Refseq: | NM_024226 |
| Nearest Ensembl: | ENSMUSG00000020458 |
| Gene Name: | Rtn4 |
| Gene Alias: | 1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153 |
| Gene Description: | reticulon 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.338308 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -95(CTTTCTAAAAGC,-,0.00) |
