Difference between revisions of "TSS:Mm 101466.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=76266 | |distance_to_tss=76266 | ||
|end=30573144 | |end=30573144 | ||
| Line 9: | Line 9: | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
|gene_alias=2310004B09Rik | |gene_alias=2310004B09Rik | ||
| − | |gene_description= | + | |gene_description=acylphosphatase 2, muscle type |
|gene_name=Acyp2 | |gene_name=Acyp2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 21: | Line 21: | ||
|start_of_center_position=30573129 | |start_of_center_position=30573129 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-42(CGCCTTTAAAGC,-,0.00),-41(GCCTTTAAAGCC,+,0.00),-40(CCTTTAAAGCCG,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:41, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 30573129 |
|---|---|
| End of the center position in the TSS region: | 30573130 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 76266 |
|---|---|
| Nearest PromoterID: | NM_029344 |
| Entrez ID: | 75572 |
| Nearest Unigene: | Mm.390319 |
| Nearest Refseq: | NM_029344 |
| Nearest Ensembl: | ENSMUSG00000060923 |
| Gene Name: | Acyp2 |
| Gene Alias: | 2310004B09Rik |
| Gene Description: | acylphosphatase 2, muscle type |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -42(CGCCTTTAAAGC,-,0.00),-41(GCCTTTAAAGCC,+,0.00),-40(CCTTTAAAGCCG,+,0.00) |
