Difference between revisions of "TSS:Mm 101481.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000020553.4:-9 AK010914:-9 AK021391:-9 AK007629:11 BC025100:19 AK156798:-22 ENSMUST00000101394.4:-25 AK078993:-25 | + | |all_trans=ENSMUST00000020553.4:-9 AK010914:-9 AK021391:-9 AK007629:11 BC025100:19 AK156798:-22 ENSMUST00000101394.4:-25 AK078993:-25 NM_026527:-40 NM_001290667:-40 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=ChaC, cation transport regulator 2 |
|gene_id=68044 | |gene_id=68044 | ||
| − | |gene_name= | + | |gene_name=ChaC, cation transport regulator 2 |
|gene_source=MGI:1915294 | |gene_source=MGI:1915294 | ||
|gene_symbol=Chac2 | |gene_symbol=Chac2 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=MGI:1915294 | |hgnc_mgi_id=MGI:1915294 | ||
|nearest_ensembl=ENSMUSG00000020309 | |nearest_ensembl=ENSMUSG00000020309 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001290667 |
|nearest_refseq=NM_026527 | |nearest_refseq=NM_026527 | ||
|nearest_unigene=Mm.32656 | |nearest_unigene=Mm.32656 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=mouse | |species=mouse | ||
|start=30986297 | |start=30986297 | ||
Revision as of 16:41, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 30986311 |
|---|---|
| End of the center position in the TSS region: | 30986312 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000020553.4 AK010914 AK021391 |
|---|---|
| Distance: | -9 |
| Num_trans: | 10 |
| All_trans: | ENSMUST00000020553.4:-9 AK010914:-9 AK021391:-9 AK007629:11 BC025100:19 AK156798:-22 ENSMUST00000101394.4:-25 AK078993:-25 NM_026527:-40 NM_001290667:-40 |
TATA-Box annotation
| Distance to TSS: | 54 |
|---|---|
| Nearest PromoterID: | NM_001290667 |
| Entrez ID: | 68044 |
| Nearest Unigene: | Mm.32656 |
| Nearest Refseq: | NM_026527 |
| Nearest Ensembl: | ENSMUSG00000020309 |
| Gene Name: | ChaC, cation transport regulator 2 |
| Gene Alias: | - |
| Gene Description: | ChaC, cation transport regulator 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
