Difference between revisions of "TSS:Mm 101500.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|OTTMUSG00000005365= | |OTTMUSG00000005365= | ||
| − | |all_trans=AK081035:-50 | + | |all_trans=LF226706:38 MA462283:38 AK081035:-50 LF198419:-51 MA433996:-51 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=38 |
|distance_to_tss=-34898 | |distance_to_tss=-34898 | ||
|end=32136145 | |end=32136145 | ||
| Line 13: | Line 13: | ||
|gene_description=predicted gene 12108 | |gene_description=predicted gene 12108 | ||
|gene_id=104692 | |gene_id=104692 | ||
| − | |gene_name= | + | |gene_name=Gm12108 |
|gene_source=MGI:3651176 | |gene_source=MGI:3651176 | ||
|gene_symbol=Gm12108 | |gene_symbol=Gm12108 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NR_130637 | |nearest_refseq=NR_130637 | ||
|nearest_unigene=Mm.414035 | |nearest_unigene=Mm.414035 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=mouse | |species=mouse | ||
|start=32136107 | |start=32136107 | ||
|start_of_center_position=32136126 | |start_of_center_position=32136126 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF226706 MA462283 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_101500.1 | |tss_id=mm_101500.1 | ||
Latest revision as of 16:42, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 32136126 |
|---|---|
| End of the center position in the TSS region: | 32136127 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF226706 MA462283 |
|---|---|
| Distance: | 38 |
| Num_trans: | 5 |
| All_trans: | LF226706:38 MA462283:38 AK081035:-50 LF198419:-51 MA433996:-51 |
TATA-Box annotation
| Distance to TSS: | -34898 |
|---|---|
| Nearest PromoterID: | NR_130637 |
| Entrez ID: | 104692 |
| Nearest Unigene: | Mm.414035 |
| Nearest Refseq: | NR_130637 |
| Nearest Ensembl: | ENSMUSG00000086386 |
| Gene Name: | Gm12108 |
| Gene Alias: | BB052462 |
| Gene Description: | predicted gene 12108 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
