Difference between revisions of "TSS:Mm 101504.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000020518.10:-8 ENSMUST00000131979.1:-8 NM_008374:-8 NM_001134458 | + | |all_trans=ENSMUST00000020518.10:-8 ENSMUST00000131979.1:-8 NM_008374:-8 NM_001134458:-8 ENSMUST00000128311.7:13 AK088694:13 ENSMUST00000145401.7:27 ENSMUST00000142396.1:27 M84746:27 BC111909:27 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=MGI:96564 | |hgnc_mgi_id=MGI:96564 | ||
|nearest_ensembl=ENSMUSG00000020279 | |nearest_ensembl=ENSMUSG00000020279 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_008374 |
|nearest_refseq=NM_008374 | |nearest_refseq=NM_008374 | ||
|nearest_unigene=Mm.384 | |nearest_unigene=Mm.384 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=mouse | |species=mouse | ||
|start=32200248 | |start=32200248 | ||
|start_of_center_position=32200259 | |start_of_center_position=32200259 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000020518.10 ENSMUST00000131979.1 NM_008374 NM_001134458 | + | |transcript_name=ENSMUST00000020518.10 ENSMUST00000131979.1 NM_008374 NM_001134458 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101504.1 | |tss_id=mm_101504.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A2AVE0 | + | |uniprot_id=A2AVE0 F8WJ69 Q78PA5 |
}} | }} | ||
Revision as of 16:42, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 32200259 |
|---|---|
| End of the center position in the TSS region: | 32200260 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000020518.10 ENSMUST00000131979.1 NM_008374 NM_001134458 |
|---|---|
| Distance: | -8 |
| Num_trans: | 10 |
| All_trans: | ENSMUST00000020518.10:-8 ENSMUST00000131979.1:-8 NM_008374:-8 NM_001134458:-8 ENSMUST00000128311.7:13 AK088694:13 ENSMUST00000145401.7:27 ENSMUST00000142396.1:27 M84746:27 BC111909:27 |
TATA-Box annotation
| Distance to TSS: | 19 |
|---|---|
| Nearest PromoterID: | NM_008374 |
| Entrez ID: | 16199 |
| Nearest Unigene: | Mm.384 |
| Nearest Refseq: | NM_008374 |
| Nearest Ensembl: | ENSMUSG00000020279 |
| Gene Name: | interleukin 9 receptor |
| Gene Alias: | - |
| Gene Description: | interleukin 9 receptor |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
