Difference between revisions of "TSS:Mm 101525.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|FGF-18= | |FGF-18= | ||
| − | |all_trans=ENSMUST00000020507.7:9 NM_008005:9 NR_102395 | + | |all_trans=ENSMUST00000020507.7:9 NM_008005:9 NR_102395:9 AF075291:9 BC156769:134 BC152852:134 AF211187:136 AB004639:136 AK078245:191 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.185 | |cpg_percent=0.185 | ||
| Line 10: | Line 10: | ||
|entrez_id=14172 | |entrez_id=14172 | ||
|gc_percent=0.825871 | |gc_percent=0.825871 | ||
| − | |gene_alias=D130055P09Rik | + | |gene_alias=D130055P09Rik{{!}}FGF-18 |
|gene_description=fibroblast growth factor 18 | |gene_description=fibroblast growth factor 18 | ||
|gene_id=14172 | |gene_id=14172 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=MGI:1277980 | |hgnc_mgi_id=MGI:1277980 | ||
|nearest_ensembl=ENSMUSG00000057967 | |nearest_ensembl=ENSMUSG00000057967 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_008005 |
|nearest_refseq=NM_008005 | |nearest_refseq=NM_008005 | ||
|nearest_unigene=Mm.339812 | |nearest_unigene=Mm.339812 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=mouse | |species=mouse | ||
|start=33147408 | |start=33147408 | ||
|start_of_center_position=33147428 | |start_of_center_position=33147428 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000020507.7 NM_008005 NR_102395 | + | |transcript_name=ENSMUST00000020507.7 NM_008005 NR_102395 AF075291 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101525.1 | |tss_id=mm_101525.1 | ||
Revision as of 16:42, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 33147428 |
|---|---|
| End of the center position in the TSS region: | 33147429 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000020507.7 NM_008005 NR_102395 AF075291 |
|---|---|
| Distance: | 9 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000020507.7:9 NM_008005:9 NR_102395:9 AF075291:9 BC156769:134 BC152852:134 AF211187:136 AB004639:136 AK078245:191 |
TATA-Box annotation
| Distance to TSS: | -28 |
|---|---|
| Nearest PromoterID: | NM_008005 |
| Entrez ID: | 14172 |
| Nearest Unigene: | Mm.339812 |
| Nearest Refseq: | NM_008005 |
| Nearest Ensembl: | ENSMUSG00000057967 |
| Gene Name: | fibroblast growth factor 18 |
| Gene Alias: | D130055P09Rik|FGF-18 |
| Gene Description: | fibroblast growth factor 18 |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.825871 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
