Difference between revisions of "TSS:Mm 101531.1"
From referenceTSS
| Line 2: | Line 2: | ||
|Rnx= | |Rnx= | ||
|Tlx1l2= | |Tlx1l2= | ||
| − | |all_trans=NM_019916 | + | |all_trans=NM_019916:-27 AK141870:-27 ENSMUST00000037746.7:-28 BC141308:34 BC145631:34 AJ223801:93 LF203005:-397 MA438582:-397 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 11: | Line 11: | ||
|entrez_id=27140 | |entrez_id=27140 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=Hox11l2 | + | |gene_alias=Hox11l2{{!}}Rnx{{!}}Tlx1l2 |
| − | |gene_description= | + | |gene_description=T cell leukemia, homeobox 3 |
|gene_id=27140 | |gene_id=27140 | ||
| − | |gene_name= | + | |gene_name=T cell leukemia, homeobox 3 |
|gene_source=MGI:1351209 | |gene_source=MGI:1351209 | ||
|gene_symbol=Tlx3 | |gene_symbol=Tlx3 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_019916 | |nearest_refseq=NM_019916 | ||
|nearest_unigene=Mm.25362 | |nearest_unigene=Mm.25362 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=mouse | |species=mouse | ||
|start=33203551 | |start=33203551 | ||
|start_of_center_position=33203556 | |start_of_center_position=33203556 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_019916 | + | |transcript_name=NM_019916 AK141870 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101531.1 | |tss_id=mm_101531.1 | ||
Revision as of 16:42, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 33203556 |
|---|---|
| End of the center position in the TSS region: | 33203557 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_019916 AK141870 |
|---|---|
| Distance: | -27 |
| Num_trans: | 8 |
| All_trans: | NM_019916:-27 AK141870:-27 ENSMUST00000037746.7:-28 BC141308:34 BC145631:34 AJ223801:93 LF203005:-397 MA438582:-397 |
TATA-Box annotation
| Distance to TSS: | 32 |
|---|---|
| Nearest PromoterID: | NM_019916 |
| Entrez ID: | 27140 |
| Nearest Unigene: | Mm.25362 |
| Nearest Refseq: | NM_019916 |
| Nearest Ensembl: | ENSMUSG00000040610 |
| Gene Name: | T cell leukemia, homeobox 3 |
| Gene Alias: | Hox11l2|Rnx|Tlx1l2 |
| Gene Description: | T cell leukemia, homeobox 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
