Difference between revisions of "TSS:Mm 101533.1"
From referenceTSS
| Line 2: | Line 2: | ||
|Rnx= | |Rnx= | ||
|Tlx1l2= | |Tlx1l2= | ||
| − | |all_trans=ENSMUST00000037746.7:1 NM_019916 | + | |all_trans=ENSMUST00000037746.7:1 NM_019916:2 AK141870:2 BC141308:72 BC145631:72 AJ223801:131 LF203005:-359 MA438582:-359 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 11: | Line 11: | ||
|entrez_id=27140 | |entrez_id=27140 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=Hox11l2 | + | |gene_alias=Hox11l2{{!}}Rnx{{!}}Tlx1l2 |
| − | |gene_description= | + | |gene_description=T cell leukemia, homeobox 3 |
|gene_id=27140 | |gene_id=27140 | ||
| − | |gene_name= | + | |gene_name=T cell leukemia, homeobox 3 |
|gene_source=MGI:1351209 | |gene_source=MGI:1351209 | ||
|gene_symbol=Tlx3 | |gene_symbol=Tlx3 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_019916 | |nearest_refseq=NM_019916 | ||
|nearest_unigene=Mm.25362 | |nearest_unigene=Mm.25362 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=mouse | |species=mouse | ||
|start=33203589 | |start=33203589 | ||
Revision as of 16:42, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 33203594 |
|---|---|
| End of the center position in the TSS region: | 33203595 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000037746.7 |
|---|---|
| Distance: | 1 |
| Num_trans: | 8 |
| All_trans: | ENSMUST00000037746.7:1 NM_019916:2 AK141870:2 BC141308:72 BC145631:72 AJ223801:131 LF203005:-359 MA438582:-359 |
TATA-Box annotation
| Distance to TSS: | -6 |
|---|---|
| Nearest PromoterID: | NM_019916 |
| Entrez ID: | 27140 |
| Nearest Unigene: | Mm.25362 |
| Nearest Refseq: | NM_019916 |
| Nearest Ensembl: | ENSMUSG00000040610 |
| Gene Name: | T cell leukemia, homeobox 3 |
| Gene Alias: | Hox11l2|Rnx|Tlx1l2 |
| Gene Description: | T cell leukemia, homeobox 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
