Difference between revisions of "TSS:Mm 101535.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000129179.7:0 ENSMUST00000037522.13:0 AK016583:0 BC033503:0 AK035897:0 AK046865:0 AJ271458:1 BC148412:8 ENSMUST00000102815.9 | + | |all_trans=ENSMUST00000129179.7:0 ENSMUST00000037522.13:0 AK016583:0 BC033503:0 AK035897:0 AK046865:0 AJ271458:1 BC148412:8 ENSMUST00000102815.9:-80 NR_110973:-87 NM_023146:-87 NM_001362875:-87 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=107 |
|end=33513666 | |end=33513666 | ||
|end_of_center_position=33513647 | |end_of_center_position=33513647 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_023146 | |nearest_refseq=NM_023146 | ||
|nearest_unigene=Mm.383775 | |nearest_unigene=Mm.383775 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=mouse | |species=mouse | ||
|start=33513626 | |start=33513626 | ||
Revision as of 16:42, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 33513646 |
|---|---|
| End of the center position in the TSS region: | 33513647 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000129179.7 ENSMUST00000037522.13 AK016583 BC033503 AK035897 AK046865 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENSMUST00000129179.7:0 ENSMUST00000037522.13:0 AK016583:0 BC033503:0 AK035897:0 AK046865:0 AJ271458:1 BC148412:8 ENSMUST00000102815.9:-80 NR_110973:-87 NM_023146:-87 NM_001362875:-87 |
TATA-Box annotation
| Distance to TSS: | 107 |
|---|---|
| Nearest PromoterID: | NR_110973 |
| Entrez ID: | 66011 |
| Nearest Unigene: | Mm.383775 |
| Nearest Refseq: | NM_023146 |
| Nearest Ensembl: | ENSMUSG00000040594 |
| Gene Name: | RAN binding protein 17 |
| Gene Alias: | - |
| Gene Description: | RAN binding protein 17 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
