Difference between revisions of "TSS:Mm 101536.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK016583:28 ENSMUST00000129179.7:30 AK035897:30 BC033503:32 ENSMUST00000037522.13:42 AK046865:42 AJ271458:46 BC148412:53 ENSMUST00000102815.9 | + | |all_trans=AK016583:28 ENSMUST00000129179.7:30 AK035897:30 BC033503:32 ENSMUST00000037522.13:42 AK046865:42 AJ271458:46 BC148412:53 ENSMUST00000102815.9:-64 NR_110973:-71 NM_023146:-71 NM_001362875:-71 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
|distance=28 | |distance=28 | ||
| − | |distance_to_tss= | + | |distance_to_tss=76 |
|end=33513682 | |end=33513682 | ||
|end_of_center_position=33513677 | |end_of_center_position=33513677 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_023146 | |nearest_refseq=NM_023146 | ||
|nearest_unigene=Mm.383775 | |nearest_unigene=Mm.383775 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=mouse | |species=mouse | ||
|start=33513671 | |start=33513671 | ||
Revision as of 16:42, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 33513676 |
|---|---|
| End of the center position in the TSS region: | 33513677 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK016583 |
|---|---|
| Distance: | 28 |
| Num_trans: | 12 |
| All_trans: | AK016583:28 ENSMUST00000129179.7:30 AK035897:30 BC033503:32 ENSMUST00000037522.13:42 AK046865:42 AJ271458:46 BC148412:53 ENSMUST00000102815.9:-64 NR_110973:-71 NM_023146:-71 NM_001362875:-71 |
TATA-Box annotation
| Distance to TSS: | 76 |
|---|---|
| Nearest PromoterID: | NR_110973 |
| Entrez ID: | 66011 |
| Nearest Unigene: | Mm.383775 |
| Nearest Refseq: | NM_023146 |
| Nearest Ensembl: | ENSMUSG00000040594 |
| Gene Name: | RAN binding protein 17 |
| Gene Alias: | - |
| Gene Description: | RAN binding protein 17 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
