Difference between revisions of "TSS:Mm 101544.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss=- | + | |distance_to_tss=-23651 |
|end=33537407 | |end=33537407 | ||
|end_of_center_position=33537405 | |end_of_center_position=33537405 | ||
| Line 13: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000040594 | |nearest_ensembl=ENSMUSG00000040594 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001362875 |
|nearest_refseq=NM_023146 | |nearest_refseq=NM_023146 | ||
|nearest_unigene=Mm.383775 | |nearest_unigene=Mm.383775 | ||
| Line 21: | Line 21: | ||
|start_of_center_position=33537404 | |start_of_center_position=33537404 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-68(CTCCTTAAAAGA,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:43, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 33537404 |
|---|---|
| End of the center position in the TSS region: | 33537405 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -23651 |
|---|---|
| Nearest PromoterID: | NM_001362875 |
| Entrez ID: | 66011 |
| Nearest Unigene: | Mm.383775 |
| Nearest Refseq: | NM_023146 |
| Nearest Ensembl: | ENSMUSG00000040594 |
| Gene Name: | Ranbp17 |
| Gene Alias: | - |
| Gene Description: | RAN binding protein 17 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -68(CTCCTTAAAAGA,-,0.00) |
