Difference between revisions of "TSS:Mm 101551.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.045 |distance= |distance_to_tss=88535 |end=33755056 |entrez_id=70357 |gc_percent=0.532338 |gene_alias=KCHIP1|Kchip1.2 |gene_description=K...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Kchip1.2= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=-74368 |
|end=33755056 | |end=33755056 | ||
| + | |end_of_center_position=33755051 | ||
|entrez_id=70357 | |entrez_id=70357 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| − | |gene_alias=KCHIP1 | + | |gene_alias=KCHIP1{{!}}Kchip1.2 |
|gene_description=Kv channel-interacting protein 1 | |gene_description=Kv channel-interacting protein 1 | ||
|gene_name=Kcnip1 | |gene_name=Kcnip1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000053519 | |nearest_ensembl=ENSMUSG00000053519 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001363115 |
|nearest_refseq=NM_027398 | |nearest_refseq=NM_027398 | ||
|nearest_unigene=Mm.252514 | |nearest_unigene=Mm.252514 | ||
| Line 18: | Line 20: | ||
|species=mouse | |species=mouse | ||
|start=33755044 | |start=33755044 | ||
| + | |start_of_center_position=33755050 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 16:43, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 33755050 |
|---|---|
| End of the center position in the TSS region: | 33755051 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -74368 |
|---|---|
| Nearest PromoterID: | NM_001363115 |
| Entrez ID: | 70357 |
| Nearest Unigene: | Mm.252514 |
| Nearest Refseq: | NM_027398 |
| Nearest Ensembl: | ENSMUSG00000053519 |
| Gene Name: | Kcnip1 |
| Gene Alias: | KCHIP1|Kchip1.2 |
| Gene Description: | Kv channel-interacting protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
