Difference between revisions of "TSS:Mm 101558.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.03 |distance= |distance_to_tss=-29997 |end=33933018 |entrez_id=16533 |gc_percent=0.562189 |gene_alias=BKbeta1 |gene_description="potassiu...") |
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|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-29997 | |distance_to_tss=-29997 | ||
|end=33933018 | |end=33933018 | ||
| + | |end_of_center_position=33933016 | ||
|entrez_id=16533 | |entrez_id=16533 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
|gene_alias=BKbeta1 | |gene_alias=BKbeta1 | ||
| − | |gene_description= | + | |gene_description=potassium large conductance calcium-activated channel, subfamily M, beta member 1 |
|gene_name=Kcnmb1 | |gene_name=Kcnmb1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 18: | Line 19: | ||
|species=mouse | |species=mouse | ||
|start=33933013 | |start=33933013 | ||
| + | |start_of_center_position=33933015 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-32(GGTTATATAAGA,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:43, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 33933015 |
|---|---|
| End of the center position in the TSS region: | 33933016 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -29997 |
|---|---|
| Nearest PromoterID: | NM_031169 |
| Entrez ID: | 16533 |
| Nearest Unigene: | Mm.6206 |
| Nearest Refseq: | NM_031169 |
| Nearest Ensembl: | ENSMUSG00000020155 |
| Gene Name: | Kcnmb1 |
| Gene Alias: | BKbeta1 |
| Gene Description: | potassium large conductance calcium-activated channel, subfamily M, beta member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(GGTTATATAAGA,-,0.00) |
