Difference between revisions of "TSS:Mm 101605.1"
From referenceTSS
| Line 4: | Line 4: | ||
|AA409762= | |AA409762= | ||
|Ccdc99= | |Ccdc99= | ||
| − | |all_trans=BC006674:0 AK011138:0 ENSMUST00000148387.1:12 AK163303:12 ENSMUST00000093191.2:-15 NM_027411:-15 | + | |all_trans=BC006674:0 AK011138:0 ENSMUST00000148387.1:12 AK163303:12 ENSMUST00000093191.2:-15 NM_027411:-15 AK012927:-15 LF198432:-46 MA434009:-46 LF226964:70 MA462541:70 AK139553:89 LF226963:318 MA462540:318 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| Line 13: | Line 13: | ||
|entrez_id=70385 | |entrez_id=70385 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=1700018I02Rik | + | |gene_alias=1700018I02Rik{{!}}2600001J17Rik{{!}}2810049B11Rik{{!}}AA409762{{!}}Ccdc99 |
|gene_description=spindle apparatus coiled-coil protein 1 | |gene_description=spindle apparatus coiled-coil protein 1 | ||
|gene_id=70385 | |gene_id=70385 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_027411 | |nearest_refseq=NM_027411 | ||
|nearest_unigene=Mm.194368 | |nearest_unigene=Mm.194368 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=mouse | |species=mouse | ||
|start=34833603 | |start=34833603 | ||
Revision as of 16:44, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 34833614 |
|---|---|
| End of the center position in the TSS region: | 34833615 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC006674 AK011138 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | BC006674:0 AK011138:0 ENSMUST00000148387.1:12 AK163303:12 ENSMUST00000093191.2:-15 NM_027411:-15 AK012927:-15 LF198432:-46 MA434009:-46 LF226964:70 MA462541:70 AK139553:89 LF226963:318 MA462540:318 |
TATA-Box annotation
| Distance to TSS: | 26 |
|---|---|
| Nearest PromoterID: | NM_027411 |
| Entrez ID: | 70385 |
| Nearest Unigene: | Mm.194368 |
| Nearest Refseq: | NM_027411 |
| Nearest Ensembl: | ENSMUSG00000069910 |
| Gene Name: | spindle apparatus coiled-coil protein 1 |
| Gene Alias: | 1700018I02Rik|2600001J17Rik|2810049B11Rik|AA409762|Ccdc99 |
| Gene Description: | spindle apparatus coiled-coil protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
