Difference between revisions of "TSS:Mm 101608.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.005 |distance= |distance_to_tss=-37903 |end=34871545 |entrez_id=70385 |gc_percent=0.442786 |gene_alias=1700018I02Rik|2600001J17Rik|281004...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |2600001J17Rik= | ||
| + | |2810049B11Rik= | ||
| + | |AA409762= | ||
| + | |Ccdc99= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-37903 | |distance_to_tss=-37903 | ||
|end=34871545 | |end=34871545 | ||
| + | |end_of_center_position=34871544 | ||
|entrez_id=70385 | |entrez_id=70385 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| − | |gene_alias=1700018I02Rik | + | |gene_alias=1700018I02Rik{{!}}2600001J17Rik{{!}}2810049B11Rik{{!}}AA409762{{!}}Ccdc99 |
|gene_description=spindle apparatus coiled-coil protein 1 | |gene_description=spindle apparatus coiled-coil protein 1 | ||
|gene_name=Spdl1 | |gene_name=Spdl1 | ||
| Line 18: | Line 23: | ||
|species=mouse | |species=mouse | ||
|start=34871542 | |start=34871542 | ||
| + | |start_of_center_position=34871543 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-34(GAGTATAAATAG,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:44, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 34871543 |
|---|---|
| End of the center position in the TSS region: | 34871544 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -37903 |
|---|---|
| Nearest PromoterID: | NM_027411 |
| Entrez ID: | 70385 |
| Nearest Unigene: | Mm.194368 |
| Nearest Refseq: | NM_027411 |
| Nearest Ensembl: | ENSMUSG00000069910 |
| Gene Name: | Spdl1 |
| Gene Alias: | 1700018I02Rik|2600001J17Rik|2810049B11Rik|AA409762|Ccdc99 |
| Gene Description: | spindle apparatus coiled-coil protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(GAGTATAAATAG,-,0.00) |
