Difference between revisions of "TSS:Mm 101615.1"
From referenceTSS
| Line 3: | Line 3: | ||
|AL033339= | |AL033339= | ||
|AW985894= | |AW985894= | ||
| − | |all_trans=NM_025936 | + | |all_trans=NM_025936:0 ENSMUST00000018992.3:13 AK011383:13 AK076160:17 AK152108:17 AK166097:17 AK168194:17 AK149856:17 AK160216:17 BC020132:33 ENSMUST00000137815.1:58 AK220048:68 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| Line 12: | Line 12: | ||
|entrez_id=104458 | |entrez_id=104458 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=2610011N19Rik | + | |gene_alias=2610011N19Rik{{!}}2610037E21Rik{{!}}AL033339{{!}}AW985894 |
|gene_description=arginyl-tRNA synthetase | |gene_description=arginyl-tRNA synthetase | ||
|gene_id=104458 | |gene_id=104458 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_025936 | |nearest_refseq=NM_025936 | ||
|nearest_unigene=Mm.284906 | |nearest_unigene=Mm.284906 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=mouse | |species=mouse | ||
|start=35834518 | |start=35834518 | ||
|start_of_center_position=35834524 | |start_of_center_position=35834524 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_025936 | + | |transcript_name=NM_025936 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101615.1 | |tss_id=mm_101615.1 | ||
Revision as of 16:44, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35834524 |
|---|---|
| End of the center position in the TSS region: | 35834525 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_025936 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | NM_025936:0 ENSMUST00000018992.3:13 AK011383:13 AK076160:17 AK152108:17 AK166097:17 AK168194:17 AK149856:17 AK160216:17 BC020132:33 ENSMUST00000137815.1:58 AK220048:68 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_025936 |
| Entrez ID: | 104458 |
| Nearest Unigene: | Mm.284906 |
| Nearest Refseq: | NM_025936 |
| Nearest Ensembl: | ENSMUSG00000018848 |
| Gene Name: | arginyl-tRNA synthetase |
| Gene Alias: | 2610011N19Rik|2610037E21Rik|AL033339|AW985894 |
| Gene Description: | arginyl-tRNA synthetase |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
