Difference between revisions of "TSS:Mm 101624.1"
From referenceTSS
| Line 3: | Line 3: | ||
|BC037006= | |BC037006= | ||
|Kibra= | |Kibra= | ||
| − | |all_trans=AK220259:-11 ENSMUST00000018993.6:-71 NM_170779: | + | |all_trans=AK220259:-11 ENSMUST00000018993.6:-71 NM_170779:-71 KY442316:-143 AB271907:354 DQ256090:354 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
|distance=-11 | |distance=-11 | ||
| − | |distance_to_tss= | + | |distance_to_tss=78 |
|end=35980456 | |end=35980456 | ||
|end_of_center_position=35980450 | |end_of_center_position=35980450 | ||
|entrez_id=211652 | |entrez_id=211652 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
| − | |gene_alias=AA408228 | + | |gene_alias=AA408228{{!}}AU017197{{!}}BC037006{{!}}Kibra |
| − | |gene_description= | + | |gene_description=WW, C2 and coiled-coil domain containing 1 |
|gene_id=211652 | |gene_id=211652 | ||
| − | |gene_name= | + | |gene_name=WW, C2 and coiled-coil domain containing 1 |
|gene_source=MGI:2388637 | |gene_source=MGI:2388637 | ||
|gene_symbol=Wwc1 | |gene_symbol=Wwc1 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_170779 | |nearest_refseq=NM_170779 | ||
|nearest_unigene=Mm.31267 | |nearest_unigene=Mm.31267 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=mouse | |species=mouse | ||
|start=35980442 | |start=35980442 | ||
Revision as of 16:45, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35980449 |
|---|---|
| End of the center position in the TSS region: | 35980450 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK220259 |
|---|---|
| Distance: | -11 |
| Num_trans: | 6 |
| All_trans: | AK220259:-11 ENSMUST00000018993.6:-71 NM_170779:-71 KY442316:-143 AB271907:354 DQ256090:354 |
TATA-Box annotation
| Distance to TSS: | 78 |
|---|---|
| Nearest PromoterID: | NM_170779 |
| Entrez ID: | 211652 |
| Nearest Unigene: | Mm.31267 |
| Nearest Refseq: | NM_170779 |
| Nearest Ensembl: | ENSMUSG00000018849 |
| Gene Name: | WW, C2 and coiled-coil domain containing 1 |
| Gene Alias: | AA408228|AU017197|BC037006|Kibra |
| Gene Description: | WW, C2 and coiled-coil domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
