Difference between revisions of "TSS:Mm 101665.1"
From referenceTSS
| Line 5: | Line 5: | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=174049 | |distance_to_tss=174049 | ||
|end=36770196 | |end=36770196 | ||
| Line 11: | Line 11: | ||
|entrez_id=23964 | |entrez_id=23964 | ||
|gc_percent=0.368159 | |gc_percent=0.368159 | ||
| − | |gene_alias=Odz2 | + | |gene_alias=Odz2{{!}}Odz3{{!}}Ten-2{{!}}Ten-m2 |
|gene_description=teneurin transmembrane protein 2 | |gene_description=teneurin transmembrane protein 2 | ||
|gene_name=Tenm2 | |gene_name=Tenm2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000049336 | |nearest_ensembl=ENSMUSG00000049336 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_011856 |
|nearest_refseq=NM_011856 | |nearest_refseq=NM_011856 | ||
|nearest_unigene=Mm.439889 | |nearest_unigene=Mm.439889 | ||
| Line 24: | Line 24: | ||
|start_of_center_position=36770191 | |start_of_center_position=36770191 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-14(TCCCTTATAAAG,-,0.00),-12(CCTTATAAAGGG,+,0.00),-12(CCTTATAAAGGG,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:46, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 36770191 |
|---|---|
| End of the center position in the TSS region: | 36770192 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 174049 |
|---|---|
| Nearest PromoterID: | NM_011856 |
| Entrez ID: | 23964 |
| Nearest Unigene: | Mm.439889 |
| Nearest Refseq: | NM_011856 |
| Nearest Ensembl: | ENSMUSG00000049336 |
| Gene Name: | Tenm2 |
| Gene Alias: | Odz2|Odz3|Ten-2|Ten-m2 |
| Gene Description: | teneurin transmembrane protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.368159 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -14(TCCCTTATAAAG,-,0.00),-12(CCTTATAAAGGG,+,0.00),-12(CCTTATAAAGGG,-,0.00) |
