Difference between revisions of "TSS:Mm 101689.1"
From referenceTSS
| Line 6: | Line 6: | ||
|MATIIbeta= | |MATIIbeta= | ||
|TGR= | |TGR= | ||
| − | |all_trans=ENSMUST00000101347.9:4 NM_001199274:4 | + | |all_trans=ENSMUST00000101347.9:4 NM_001199274:4 LF198435:-71 MA434012:-71 ENSMUST00000135617.1:220 AK162087:266 AK075947:266 AK075600:301 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 15: | Line 15: | ||
|entrez_id=108645 | |entrez_id=108645 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| − | |gene_alias=1110064C04Rik | + | |gene_alias=1110064C04Rik{{!}}2410018D16Rik{{!}}AI182287{{!}}AU022853{{!}}MAT-II{{!}}MATIIbeta{{!}}TGR |
| − | |gene_description= | + | |gene_description=methionine adenosyltransferase II, beta |
|gene_id=108645 | |gene_id=108645 | ||
| − | |gene_name= | + | |gene_name=methionine adenosyltransferase II, beta |
|gene_source=MGI:1913667 | |gene_source=MGI:1913667 | ||
|gene_symbol=Mat2b | |gene_symbol=Mat2b | ||
| Line 28: | Line 28: | ||
|nearest_refseq=NM_134017 | |nearest_refseq=NM_134017 | ||
|nearest_unigene=Mm.293771 | |nearest_unigene=Mm.293771 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=mouse | |species=mouse | ||
|start=40695206 | |start=40695206 | ||
|start_of_center_position=40695214 | |start_of_center_position=40695214 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000101347.9 NM_001199274 | + | |transcript_name=ENSMUST00000101347.9 NM_001199274 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101689.1 | |tss_id=mm_101689.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q99LB6 | + | |uniprot_id=Q99LB6 |
}} | }} | ||
Revision as of 16:46, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 40695214 |
|---|---|
| End of the center position in the TSS region: | 40695215 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000101347.9 NM_001199274 |
|---|---|
| Distance: | 4 |
| Num_trans: | 8 |
| All_trans: | ENSMUST00000101347.9:4 NM_001199274:4 LF198435:-71 MA434012:-71 ENSMUST00000135617.1:220 AK162087:266 AK075947:266 AK075600:301 |
TATA-Box annotation
| Distance to TSS: | -12 |
|---|---|
| Nearest PromoterID: | NM_001199274 |
| Entrez ID: | 108645 |
| Nearest Unigene: | Mm.293771 |
| Nearest Refseq: | NM_134017 |
| Nearest Ensembl: | ENSMUSG00000042032 |
| Gene Name: | methionine adenosyltransferase II, beta |
| Gene Alias: | 1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR |
| Gene Description: | methionine adenosyltransferase II, beta |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
