Difference between revisions of "TSS:Mm 101700.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC006609:7 AK167486:-25 AK159429:-26 AK153392:-30 AK167052:-30 AK159831:-33 Z37110:-42 L49507:-42 AK160411:-73 AK128957:-84 AK170397:-86 AK147026:-86 AK143114:-89 NM_009831 | + | |all_trans=BC006609:7 AK167486:-25 AK159429:-26 AK153392:-30 AK167052:-30 AK159831:-33 Z37110:-42 L49507:-42 AK160411:-73 AK128957:-84 AK170397:-86 AK147026:-86 AK143114:-89 NM_009831:-99 ENSMUST00000020576.7:-124 AK136645:154 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_009831 | |nearest_refseq=NM_009831 | ||
|nearest_unigene=Mm.2103 | |nearest_unigene=Mm.2103 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=mouse | |species=mouse | ||
|start=40755176 | |start=40755176 | ||
Revision as of 16:46, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 40755181 |
|---|---|
| End of the center position in the TSS region: | 40755182 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC006609 |
|---|---|
| Distance: | 7 |
| Num_trans: | 16 |
| All_trans: | BC006609:7 AK167486:-25 AK159429:-26 AK153392:-30 AK167052:-30 AK159831:-33 Z37110:-42 L49507:-42 AK160411:-73 AK128957:-84 AK170397:-86 AK147026:-86 AK143114:-89 NM_009831:-99 ENSMUST00000020576.7:-124 AK136645:154 |
TATA-Box annotation
| Distance to TSS: | 104 |
|---|---|
| Nearest PromoterID: | NM_009831 |
| Entrez ID: | 12450 |
| Nearest Unigene: | Mm.2103 |
| Nearest Refseq: | NM_009831 |
| Nearest Ensembl: | ENSMUSG00000020326 |
| Gene Name: | cyclin G1 |
| Gene Alias: | AI314029 |
| Gene Description: | cyclin G1 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
