Difference between revisions of "TSS:Mm 101701.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_009831 | + | |all_trans=NM_009831:0 AK159429:0 AK153392:0 AK159831:0 Z37110:0 AK128957:0 AK170397:0 AK147026:0 AK143114:0 AK160411:0 AK167052:0 L49507:0 AK167486:0 ENSMUST00000020576.7:-23 BC006609:32 AK136645:179 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_009831 | |nearest_refseq=NM_009831 | ||
|nearest_unigene=Mm.2103 | |nearest_unigene=Mm.2103 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=mouse | |species=mouse | ||
|start=40755201 | |start=40755201 | ||
|start_of_center_position=40755244 | |start_of_center_position=40755244 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_009831 | + | |transcript_name=NM_009831 AK159429 AK153392 AK159831 Z37110 AK128957 AK170397 AK147026 AK143114 AK160411 AK167052 L49507 AK167486 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101701.1 | |tss_id=mm_101701.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q3TKC9 Q3TV43 Q3TX40 Q3U5X0 Q5NC86 |
}} | }} | ||
Revision as of 16:46, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 40755244 |
|---|---|
| End of the center position in the TSS region: | 40755245 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_009831 AK159429 AK153392 AK159831 Z37110 AK128957 AK170397 AK147026 AK143114 AK160411 AK167052 L49507 AK167486 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | NM_009831:0 AK159429:0 AK153392:0 AK159831:0 Z37110:0 AK128957:0 AK170397:0 AK147026:0 AK143114:0 AK160411:0 AK167052:0 L49507:0 AK167486:0 ENSMUST00000020576.7:-23 BC006609:32 AK136645:179 |
TATA-Box annotation
| Distance to TSS: | 41 |
|---|---|
| Nearest PromoterID: | NM_009831 |
| Entrez ID: | 12450 |
| Nearest Unigene: | Mm.2103 |
| Nearest Refseq: | NM_009831 |
| Nearest Ensembl: | ENSMUSG00000020326 |
| Gene Name: | cyclin G1 |
| Gene Alias: | AI314029 |
| Gene Description: | cyclin G1 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
