Difference between revisions of "TSS:Mm 101714.1"
From referenceTSS
| Line 4: | Line 4: | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=-160 | |distance=-160 | ||
| − | |distance_to_tss= | + | |distance_to_tss=2529 |
|end=42179683 | |end=42179683 | ||
|end_of_center_position=42179669 | |end_of_center_position=42179669 | ||
|entrez_id=14394 | |entrez_id=14394 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias=Gabra-1 | + | |gene_alias=GABAA-alpha1{{!}}GABAAR-alpha1{{!}}Gabra-1 |
| − | |gene_description= | + | |gene_description=gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1 |
|gene_id=14394 | |gene_id=14394 | ||
| − | |gene_name= | + | |gene_name=gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1 |
|gene_source=MGI:95613 | |gene_source=MGI:95613 | ||
|gene_symbol=Gabra1 | |gene_symbol=Gabra1 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=MGI:95613 | |hgnc_mgi_id=MGI:95613 | ||
|nearest_ensembl=ENSMUSG00000010803 | |nearest_ensembl=ENSMUSG00000010803 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001359035 |
|nearest_refseq=NM_010250 | |nearest_refseq=NM_010250 | ||
|nearest_unigene=Mm.439668 | |nearest_unigene=Mm.439668 | ||
| Line 31: | Line 31: | ||
|tss_id=mm_101714.1 | |tss_id=mm_101714.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A0U1RPE4 |
}} | }} | ||
Revision as of 16:47, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 42179668 |
|---|---|
| End of the center position in the TSS region: | 42179669 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000206105.1 |
|---|---|
| Distance: | -160 |
| Num_trans: | 2 |
| All_trans: | ENSMUST00000206105.1:-160 ENSMUST00000153147.2:-273 |
TATA-Box annotation
| Distance to TSS: | 2529 |
|---|---|
| Nearest PromoterID: | NM_001359035 |
| Entrez ID: | 14394 |
| Nearest Unigene: | Mm.439668 |
| Nearest Refseq: | NM_010250 |
| Nearest Ensembl: | ENSMUSG00000010803 |
| Gene Name: | gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1 |
| Gene Alias: | GABAA-alpha1|GABAAR-alpha1|Gabra-1 |
| Gene Description: | gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
