Difference between revisions of "TSS:Mm 101733.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|9030605H24Rik= | |9030605H24Rik= | ||
| − | |all_trans=ENSMUST00000136288.1 | + | |all_trans=ENSMUST00000136288.1:0 AK087644:0 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 10: | Line 10: | ||
|entrez_id=319767 | |entrez_id=319767 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| − | |gene_alias=5930426O13Rik | + | |gene_alias=5930426O13Rik{{!}}9030605H24Rik |
| − | |gene_description= | + | |gene_description=ATPase, class V, type 10B |
|gene_id= | |gene_id= | ||
|gene_name=predicted gene 12144 | |gene_name=predicted gene 12144 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_176999 | |nearest_refseq=NM_176999 | ||
|nearest_unigene=Mm.252339 | |nearest_unigene=Mm.252339 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=mouse | |species=mouse | ||
|start=43232262 | |start=43232262 | ||
|start_of_center_position=43232270 | |start_of_center_position=43232270 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000136288.1 | + | |transcript_name=ENSMUST00000136288.1 AK087644 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_101733.1 | |tss_id=mm_101733.1 | ||
Revision as of 16:47, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 43232270 |
|---|---|
| End of the center position in the TSS region: | 43232271 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000136288.1 AK087644 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | ENSMUST00000136288.1:0 AK087644:0 |
TATA-Box annotation
| Distance to TSS: | 82394 |
|---|---|
| Nearest PromoterID: | NM_176999 |
| Entrez ID: | 319767 |
| Nearest Unigene: | Mm.252339 |
| Nearest Refseq: | NM_176999 |
| Nearest Ensembl: | ENSMUSG00000055415 |
| Gene Name: | predicted gene 12144 |
| Gene Alias: | 5930426O13Rik|9030605H24Rik |
| Gene Description: | ATPase, class V, type 10B |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
