Difference between revisions of "TSS:Mm 101757.1"
From referenceTSS
| Line 3: | Line 3: | ||
|Pttg= | |Pttg= | ||
|Pttg3= | |Pttg3= | ||
| + | |all_trans=LF227022:69 MA462599:69 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=69 |
|distance_to_tss=1138 | |distance_to_tss=1138 | ||
|end=43424856 | |end=43424856 | ||
| Line 11: | Line 12: | ||
|entrez_id=30939 | |entrez_id=30939 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=AW555095 | + | |gene_alias=AW555095{{!}}C87862{{!}}Pttg{{!}}Pttg3 |
|gene_description=pituitary tumor-transforming gene 1 | |gene_description=pituitary tumor-transforming gene 1 | ||
|gene_name=Pttg1 | |gene_name=Pttg1 | ||
| Line 19: | Line 20: | ||
|nearest_refseq=NM_013917 | |nearest_refseq=NM_013917 | ||
|nearest_unigene=Mm.6856 | |nearest_unigene=Mm.6856 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=mouse | |species=mouse | ||
|start=43424830 | |start=43424830 | ||
|start_of_center_position=43424843 | |start_of_center_position=43424843 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF227022 MA462599 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_101757.1 | |tss_id=mm_101757.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:48, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 43424843 |
|---|---|
| End of the center position in the TSS region: | 43424844 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF227022 MA462599 |
|---|---|
| Distance: | 69 |
| Num_trans: | 2 |
| All_trans: | LF227022:69 MA462599:69 |
TATA-Box annotation
| Distance to TSS: | 1138 |
|---|---|
| Nearest PromoterID: | NM_013917 |
| Entrez ID: | 30939 |
| Nearest Unigene: | Mm.6856 |
| Nearest Refseq: | NM_013917 |
| Nearest Ensembl: | ENSMUSG00000020415 |
| Gene Name: | Pttg1 |
| Gene Alias: | AW555095|C87862|Pttg|Pttg3 |
| Gene Description: | pituitary tumor-transforming gene 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
