Difference between revisions of "TSS:Mm 101763.1"
From referenceTSS
| Line 5: | Line 5: | ||
|ILBP3= | |ILBP3= | ||
|Illbp= | |Illbp= | ||
| − | |all_trans=NM_008375 | + | |all_trans=NM_008375:0 ENSMUST00000020672.4:12 BC119289:20 BC120767:20 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 14: | Line 14: | ||
|entrez_id=16204 | |entrez_id=16204 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=GT | + | |gene_alias=GT{{!}}I-15P{{!}}I-BABP{{!}}ILBP{{!}}ILBP3{{!}}Illbp |
| − | |gene_description= | + | |gene_description=fatty acid binding protein 6 |
|gene_id=16204 | |gene_id=16204 | ||
| − | |gene_name= | + | |gene_name=fatty acid binding protein 6 |
|gene_source=MGI:96565 | |gene_source=MGI:96565 | ||
|gene_symbol=Fabp6 | |gene_symbol=Fabp6 | ||
| − | |gene_synonyms=I-15P I-BABP ILBP3 Illbp | + | |gene_synonyms=I-15P I-BABP ILBP3 Illbp gastrotropin |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:96565 | |hgnc_mgi_id=MGI:96565 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_008375 | |nearest_refseq=NM_008375 | ||
|nearest_unigene=Mm.142716 | |nearest_unigene=Mm.142716 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=mouse | |species=mouse | ||
|start=43601551 | |start=43601551 | ||
|start_of_center_position=43601559 | |start_of_center_position=43601559 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-35(GTGTTTATAAGC,-,0.00) |
| − | |transcript_name=NM_008375 | + | |transcript_name=NM_008375 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_101763.1 | |tss_id=mm_101763.1 | ||
Revision as of 16:48, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 43601559 |
|---|---|
| End of the center position in the TSS region: | 43601560 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_008375 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | NM_008375:0 ENSMUST00000020672.4:12 BC119289:20 BC120767:20 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_008375 |
| Entrez ID: | 16204 |
| Nearest Unigene: | Mm.142716 |
| Nearest Refseq: | NM_008375 |
| Nearest Ensembl: | ENSMUSG00000020405 |
| Gene Name: | fatty acid binding protein 6 |
| Gene Alias: | GT|I-15P|I-BABP|ILBP|ILBP3|Illbp |
| Gene Description: | fatty acid binding protein 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(GTGTTTATAAGC,-,0.00) |
