Difference between revisions of "TSS:Mm 101764.1"
From referenceTSS
| Line 3: | Line 3: | ||
|AU024105= | |AU024105= | ||
|D930040F23Rik= | |D930040F23Rik= | ||
| − | |all_trans=AK076143:0 | + | |all_trans=AK076143:0 LF198445:4 MA434022:4 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| Line 12: | Line 12: | ||
|entrez_id=70802 | |entrez_id=70802 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| − | |gene_alias=4631424J17Rik | + | |gene_alias=4631424J17Rik{{!}}AI891583{{!}}AU024105{{!}}D930040F23Rik |
|gene_description=PWWP domain containing 2A | |gene_description=PWWP domain containing 2A | ||
| − | |gene_name= | + | |gene_id=102638384 |
| + | |gene_name=predicted gene, 34963 | ||
| + | |gene_source=MGI:5594122 | ||
| + | |gene_symbol=Gm34963 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=MGI:5594122 | ||
|nearest_ensembl=ENSMUSG00000044950 | |nearest_ensembl=ENSMUSG00000044950 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001363141 |
|nearest_refseq=NM_027557 | |nearest_refseq=NM_027557 | ||
|nearest_unigene=Mm.397449 | |nearest_unigene=Mm.397449 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=mouse | |species=mouse | ||
|start=43682656 | |start=43682656 | ||
| Line 29: | Line 34: | ||
|tss_id=mm_101764.1 | |tss_id=mm_101764.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 16:48, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 43682671 |
|---|---|
| End of the center position in the TSS region: | 43682672 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK076143 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | AK076143:0 LF198445:4 MA434022:4 |
TATA-Box annotation
| Distance to TSS: | 674 |
|---|---|
| Nearest PromoterID: | NM_001363141 |
| Entrez ID: | 70802 |
| Nearest Unigene: | Mm.397449 |
| Nearest Refseq: | NM_027557 |
| Nearest Ensembl: | ENSMUSG00000044950 |
| Gene Name: | predicted gene, 34963 |
| Gene Alias: | 4631424J17Rik|AI891583|AU024105|D930040F23Rik |
| Gene Description: | PWWP domain containing 2A |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
