Difference between revisions of "TSS:Mm 101770.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000067258.8:0 ENSMUST00000139906.1:0 NM_001284381:0 NM_001284380 | + | |all_trans=ENSMUST00000067258.8:0 ENSMUST00000139906.1:0 NM_001284381:0 NM_001284380:0 AK004891:0 BC018330:0 BC037002:0 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
|gene_alias=[a]1b | |gene_alias=[a]1b | ||
| − | |gene_description= | + | |gene_description=adrenergic receptor, alpha 1b |
|gene_id=11548 | |gene_id=11548 | ||
| − | |gene_name= | + | |gene_name=adrenergic receptor, alpha 1b |
|gene_source=MGI:104774 | |gene_source=MGI:104774 | ||
|gene_symbol=Adra1b | |gene_symbol=Adra1b | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_007416 | |nearest_refseq=NM_007416 | ||
|nearest_unigene=Mm.39086 | |nearest_unigene=Mm.39086 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=mouse | |species=mouse | ||
|start=43901187 | |start=43901187 | ||
|start_of_center_position=43901214 | |start_of_center_position=43901214 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000067258.8 ENSMUST00000139906.1 NM_001284381 NM_001284380 | + | |transcript_name=ENSMUST00000067258.8 ENSMUST00000139906.1 NM_001284381 NM_001284380 AK004891 BC018330 BC037002 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_101770.1 | |tss_id=mm_101770.1 | ||
Revision as of 16:48, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 43901214 |
|---|---|
| End of the center position in the TSS region: | 43901215 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000067258.8 ENSMUST00000139906.1 NM_001284381 NM_001284380 AK004891 BC018330 BC037002 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENSMUST00000067258.8:0 ENSMUST00000139906.1:0 NM_001284381:0 NM_001284380:0 AK004891:0 BC018330:0 BC037002:0 |
TATA-Box annotation
| Distance to TSS: | 22 |
|---|---|
| Nearest PromoterID: | NM_001284380 |
| Entrez ID: | 11548 |
| Nearest Unigene: | Mm.39086 |
| Nearest Refseq: | NM_007416 |
| Nearest Ensembl: | ENSMUSG00000050541 |
| Gene Name: | adrenergic receptor, alpha 1b |
| Gene Alias: | [a]1b |
| Gene Description: | adrenergic receptor, alpha 1b |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
