Difference between revisions of "TSS:Mm 101772.1"
From referenceTSS
| Line 2: | Line 2: | ||
|8430435I17Rik= | |8430435I17Rik= | ||
|BC002236= | |BC002236= | ||
| − | |all_trans=AK153998:0 AK043952:0 AK050031:0 AK172546:0 AK015910:28 AK147744:-36 ENSMUST00000102795.3:-39 NM_024475 | + | |all_trans=AK153998:0 AK043952:0 AK050031:0 AK172546:0 AK015910:28 AK147744:-36 ENSMUST00000102795.3:-39 NM_024475:-89 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| Line 11: | Line 11: | ||
|entrez_id=79560 | |entrez_id=79560 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=4930527B16Rik | + | |gene_alias=4930527B16Rik{{!}}8430435I17Rik{{!}}BC002236 |
|gene_description=ubiquitin-like domain containing CTD phosphatase 1 | |gene_description=ubiquitin-like domain containing CTD phosphatase 1 | ||
|gene_id=79560 | |gene_id=79560 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_024475 | |nearest_refseq=NM_024475 | ||
|nearest_unigene=Mm.338784 | |nearest_unigene=Mm.338784 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=mouse | |species=mouse | ||
|start=44470442 | |start=44470442 | ||
Revision as of 16:48, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 44470450 |
|---|---|
| End of the center position in the TSS region: | 44470451 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK153998 AK043952 AK050031 AK172546 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | AK153998:0 AK043952:0 AK050031:0 AK172546:0 AK015910:28 AK147744:-36 ENSMUST00000102795.3:-39 NM_024475:-89 |
TATA-Box annotation
| Distance to TSS: | 97 |
|---|---|
| Nearest PromoterID: | NM_024475 |
| Entrez ID: | 79560 |
| Nearest Unigene: | Mm.338784 |
| Nearest Refseq: | NM_024475 |
| Nearest Ensembl: | ENSMUSG00000041231 |
| Gene Name: | ubiquitin-like domain containing CTD phosphatase 1 |
| Gene Alias: | 4930527B16Rik|8430435I17Rik|BC002236 |
| Gene Description: | ubiquitin-like domain containing CTD phosphatase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
