Difference between revisions of "TSS:Mm 101773.1"
From referenceTSS
| Line 2: | Line 2: | ||
|8430435I17Rik= | |8430435I17Rik= | ||
|BC002236= | |BC002236= | ||
| − | |all_trans=ENSMUST00000102795.3:0 AK147744:0 AK153998:7 AK050031:7 AK043952:11 AK172546:14 NM_024475 | + | |all_trans=ENSMUST00000102795.3:0 AK147744:0 AK153998:7 AK050031:7 AK043952:11 AK172546:14 NM_024475:-35 AK015910:50 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| Line 11: | Line 11: | ||
|entrez_id=79560 | |entrez_id=79560 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=4930527B16Rik | + | |gene_alias=4930527B16Rik{{!}}8430435I17Rik{{!}}BC002236 |
|gene_description=ubiquitin-like domain containing CTD phosphatase 1 | |gene_description=ubiquitin-like domain containing CTD phosphatase 1 | ||
|gene_id=79560 | |gene_id=79560 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_024475 | |nearest_refseq=NM_024475 | ||
|nearest_unigene=Mm.338784 | |nearest_unigene=Mm.338784 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=mouse | |species=mouse | ||
|start=44470464 | |start=44470464 | ||
Revision as of 16:48, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 44470488 |
|---|---|
| End of the center position in the TSS region: | 44470489 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000102795.3 AK147744 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENSMUST00000102795.3:0 AK147744:0 AK153998:7 AK050031:7 AK043952:11 AK172546:14 NM_024475:-35 AK015910:50 |
TATA-Box annotation
| Distance to TSS: | 59 |
|---|---|
| Nearest PromoterID: | NM_024475 |
| Entrez ID: | 79560 |
| Nearest Unigene: | Mm.338784 |
| Nearest Refseq: | NM_024475 |
| Nearest Ensembl: | ENSMUSG00000041231 |
| Gene Name: | ubiquitin-like domain containing CTD phosphatase 1 |
| Gene Alias: | 4930527B16Rik|8430435I17Rik|BC002236 |
| Gene Description: | ubiquitin-like domain containing CTD phosphatase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
